Gene | Srp68 |
Chromosome | 11 |
Deletion Start | 116,274,103 |
Deletion End | 116,245,631 |
Deletion Size | 28,473 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 116,273,925 | 116,273,945 | GGACAGCCTGAGTTTGGAGAG |
TUP | 116,273,900 | 116,273,923 | ATCCTCGAGCGGTGGCCTAACTCG |
TUR | 116,273,879 | 116,273,899 | CCGAGCGACACGTAGTCATTG |
TDF | 116,245,755 | 116,245,777 | GAGGACAAATTGGAGCAGAAGAC |
TDP | 116,245,729 | 116,245,753 | AAGAGTGGCCTCACAGGCTACATCA |
TDR | 116,245,686 | 116,245,706 | CCCGAGGAAGAGCCTGGTTAG |
PCR Primers
Primer | Sequence |
SU | CGGGTCTCAAGCTCCTATTG |
SD | AGAGCGCTCTGCTTGTTC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 67 bp | + | + | - |
TDF | TDR | 92 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15658A-A8 | VGB6 | C57BL/6NTac | |
15658B-B6 | VGB6 | C57BL/6NTac | |
15658B-F11 | VGB6 | C57BL/6NTac | |
15658C-C7 | VGB6 | C57BL/6NTac | |
15658C-C9 | VGB6 | C57BL/6NTac | |
15658C-D8 | VGB6 | C57BL/6NTac | |
15658C-F9 | VGB6 | C57BL/6NTac | |
15658A-B8 | VGB6 | C57BL/6NTac | |