15673   Vipar     Status: ES cell colonies screened / QC positives

GeneVipar
Chromosome12
Deletion Start87,263,994
Deletion End87,239,721
Deletion Size24,274
Genome Build38
MGI IDMGI:2144805
NCBI Gene ID104799
BAC ID357K2
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 12

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF87,263,89087,263,912TCTCACAGGTAGGTTTCCACAAG
TUP87,263,85387,263,881AAGGGTCATACCATACTCTTGGATGCGTC
TUR87,263,81987,263,841ACGAGCCTACTGGAGATGAGAAG
TDF87,239,84187,239,862GCCTTCCTTGTCTGCTTTCTTC
TDP87,239,81087,239,839CAGCAAATTCGATGGAAGAACTAAGGGTCC
TDR87,239,78687,239,805GCGAGGAGGCTTCAGGGTAG

PCR Primers

PrimerSequence
SUCCTTACAACATTTGCCTCTCG
SDGAAATGCCTATGCCCAACAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR94 bp++-
TDFTDR77 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
15673A-B2VGB6C57BL/6NTac
15673A-B4VGB6C57BL/6NTac
15673A-C5VGB6C57BL/6NTac
15673A-E3VGB6C57BL/6NTac
15673A-F1VGB6C57BL/6NTac