15772 Apobec3 Status: ES cell colonies screened / QC no positives
Gene | Apobec3 |
Chromosome | 15 |
Deletion Start | 79,907,625 |
Deletion End | 79,892,520 |
Deletion Size | 15,106 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 15
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 79,892,731 | 79,892,749 | TCTGAGCCGCTTCGGTTAC |
TUP | 79,892,753 | 79,892,779 | ATAGCTGCTTCTAAACTGGCCACCCTG |
TUR | 79,892,787 | 79,892,810 | GGAAGAAATATGGGTGACGTGGAG |
TDF | 79,907,498 | 79,907,520 | ACAGAGTCTCACTGGGTAGCTTG |
TDP | 79,907,527 | 79,907,554 | TGGAACTCACTACTAGACTAAGCTGGCC |
TDR | 79,907,577 | 79,907,596 | CTGGCTCTCAGAAGGCACTG |
PCR Primers
Primer | Sequence |
SU | TAGGCAGGTTGGATGGAGAC |
SD | GCCTGCCTGGTTGTCCAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 80 bp | + | + | - |
TDF | TDR | 99 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |