15772   Apobec3     Status: ES cell colonies screened / QC no positives

GeneApobec3
Chromosome15
Deletion Start79,907,625
Deletion End79,892,520
Deletion Size15,106
Genome Build38
MGI IDMGI:1933111
NCBI Gene ID80287
BAC ID383E3
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableNo

Primer Genomic Coordinates on Chromosome 15

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF79,892,73179,892,749TCTGAGCCGCTTCGGTTAC
TUP79,892,75379,892,779ATAGCTGCTTCTAAACTGGCCACCCTG
TUR79,892,78779,892,810GGAAGAAATATGGGTGACGTGGAG
TDF79,907,49879,907,520ACAGAGTCTCACTGGGTAGCTTG
TDP79,907,52779,907,554TGGAACTCACTACTAGACTAAGCTGGCC
TDR79,907,57779,907,596CTGGCTCTCAGAAGGCACTG

PCR Primers

PrimerSequence
SUTAGGCAGGTTGGATGGAGAC
SDGCCTGCCTGGTTGTCCAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR80 bp++-
TDFTDR99 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++