Gene | Grap2 |
Chromosome | 15 |
Deletion Start | 80,648,603 |
Deletion End | 80,623,740 |
Deletion Size | 24,864 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 15
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 80,623,950 | 80,623,970 | ACCAGATGTGGGCACATGCTC |
TUP | 80,623,975 | 80,623,999 | TCCTAGCACTCGAGAGGTAGAGGCA |
TUR | 80,624,007 | 80,624,027 | AGGCTGGCCTTGGAACTCTTG |
TDF | 80,648,486 | 80,648,507 | CGAAGCGGAGAAGTGGTTGAAG |
TDP | 80,648,511 | 80,648,534 | TGGACAGCTCCAACCCATCTTGGT |
TDR | 80,648,554 | 80,648,574 | GCAGGGAAGAGACCCAGTTTG |
PCR Primers
Primer | Sequence |
SU | TCCAGTTGATAGCAAGCCTTC |
SD | CAGGAAGGAAACGGTGAAAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 78 bp | + | + | - |
TDF | TDR | 89 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15773A-A7 | VGB6 | C57BL/6NTac | |
15773A-D9 | VGB6 | C57BL/6NTac | |
15773A-G11 | VGB6 | C57BL/6NTac | |
15773A-H8 | VGB6 | C57BL/6NTac | |
15773A-H9 | VGB6 | C57BL/6NTac | |