Gene | Abcg1 |
Chromosome | 17 |
Deletion Start | 31,064,623 |
Deletion End | 31,057,818 |
Deletion Size | 6,806 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 17
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 31,057,820 | 31,057,840 | CTGTCTGATGGCCGCTTTCTC |
TUP | 31,057,843 | 31,057,862 | TCGGCACCGCCATGGTGAGT |
TUR | 31,057,904 | 31,057,925 | CTGGCTTTGAGCTTCCTGTTTC |
TDF | 31,063,770 | 31,063,789 | GTTGCCAGTGCCTCAGTTTC |
TDP | 31,063,790 | 31,063,812 | CCTGTGCCTCAGTTTCCCTGCCT |
TDR | 31,063,832 | 31,063,851 | CGGAGGATCAGGGTTGTTTG |
PCR Primers
Primer | Sequence |
SU | TTCGTCTAGGGTTGAGCTGG |
SD | CGAAGTTTAGAGCCTCTGTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 106 bp | + | + | - |
TDF | TDR | 82 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15844A-E1 | VGB6 | C57BL/6NTac | |
15844C-E1 | VGB6 | C57BL/6NTac | |