15899   Yif1a     Status: ES cell colonies screened / QC positives

GeneYif1a
Chromosome19
Deletion Start5,092,501
Deletion End5,088,721
Deletion Size3,781
Genome Build38
MGI IDMGI:1915340
NCBI Gene ID68090
BAC ID362K2
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 19

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF5,089,0175,089,037CTTACAACTCGGGCAGCATTC
TUP5,089,0395,089,063TGACCACTGTCCAGGGACTCCGAAT
TUR5,089,1045,089,123GGCACAATCACCGCAAAGAC
TDF5,091,5825,091,601TGGTGTGGGTGTTCATGGAG
TDP5,091,6035,091,626TGTTGGCTCTGCTTCTGGGCCTCT
TDR5,091,6655,091,685GTAACCGCTGTAAGCCAAGAG

PCR Primers

PrimerSequence
SUGACGCGGAACTAAGTTAC
SDTGCTTCTGGAAGGCTTGAAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR107 bp++-
TDFTDR104 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
15899A-B6VGB6C57BL/6NTac
15899A-D2VGB6C57BL/6NTac
15899A-D4VGB6C57BL/6NTac
15899A-G2VGB6C57BL/6NTac
15899A-H7VGB6C57BL/6NTac