Gene | Ms4a7 |
Chromosome | 19 |
Deletion Start | 11,333,350 |
Deletion End | 11,321,453 |
Deletion Size | 11,898 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 19
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 11,332,734 | 11,332,755 | CCTGCTGAGACTCAATTCCTAC |
TUP | 11,332,706 | 11,332,730 | TTCCCACCTTCAGAAACCTTCCTGC |
TUR | 11,332,646 | 11,332,664 | TGAGGCTTTGGCCTTTGTC |
TDF | 11,322,397 | 11,322,417 | CCTGTGCTGCTTTGCAGAGTG |
TDP | 11,322,360 | 11,322,387 | TGATGCTTCTCTTCACTGTGCTGGAGGT |
TDR | 11,322,299 | 11,322,319 | CCCAGGTTTGTTGGAGTAGAC |
PCR Primers
Primer | Sequence |
SU | TGGATAGAGTGCAGTCTATTC |
SD | ATTGTGCAAGCAATGCAGAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 110 bp | + | + | - |
TDF | TDR | 119 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15910A-A2 | VGB6 | C57BL/6NTac | |
15910A-H11 | VGB6 | C57BL/6NTac | |
15910A-C5 | VGB6 | C57BL/6NTac | |
15910A-H10 | VGB6 | C57BL/6NTac | |
15910A-G7 | VGB6 | C57BL/6NTac | |
15910A-E2 | VGB6 | C57BL/6NTac | |