Gene | Mical1 |
Chromosome | 10 |
Deletion Start | 41,486,946 |
Deletion End | 41,478,060 |
Deletion Size | 8,887 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 10
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 41,478,077 | 41,478,095 | CAACCCAGCACATGACCAC |
TUP | 41,478,098 | 41,478,120 | TGAGACCTTTGTGCAGGCACAGC |
TUR | 41,478,157 | 41,478,175 | TCCACTCCCAGGGCTCTAC |
TDF | 41,485,991 | 41,486,009 | GCAATCAATCCGGCGTGTC |
TDP | 41,486,011 | 41,486,034 | TGCCTTACAACCCACAGGCCATCC |
TDR | 41,486,060 | 41,486,078 | CTCCAGCTCCCGCATAGTG |
PCR Primers
Primer | Sequence |
SU | GCTCCCTTAGCATCCTTGTG |
SD | ATGCTGCACGTTCTGACAAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 99 bp | + | + | - |
TDF | TDR | 88 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15964A-H11 | VGB6 | C57BL/6NTac | |
15964A-C7 | VGB6 | C57BL/6NTac | |
15964A-C10 | VGB6 | C57BL/6NTac | |
15964A-H5 | VGB6 | C57BL/6NTac | |
15964A-D6 | VGB6 | C57BL/6NTac | |
15964A-A1 | VGB6 | C57BL/6NTac | |