16054   Slc3a1     Status: ES cell colonies screened / QC positives

GeneSlc3a1
Chromosome17
Deletion Start85,064,109
Deletion End85,028,435
Deletion Size35,675
Genome Build38
MGI IDMGI:1195264
NCBI Gene ID20532
BAC ID285L7
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 17

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF85,028,83685,028,858GGATGGGAATGGAGACCTGAAAG
TUP85,028,86285,028,883CGTGTTCGCCGCTCAGGACCAA
TUR85,028,90885,028,927CACAAGCCAGGCACAGAATG
TDF85,063,20085,063,222CAGCGTGCAGTGTTCTTTCTATC
TDP85,063,22485,063,249TCAGCGATCTGAGAATCCGCATCTGC
TDR85,063,27885,063,296CTTGGGCTTGGTCCTCATC

PCR Primers

PrimerSequence
SUCGCATTACTGTAGGCAGTTGG
SDGAGAAGGGAGCCAGAAGGAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR92 bp++-
TDFTDR97 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
16054A-A3VGB6C57BL/6NTac
16054A-G2VGB6C57BL/6NTac
16054A-D2VGB6C57BL/6NTac