16080   Actr5     Status: ES cell colonies screened / QC positives

GeneActr5
Chromosome2
Deletion Start158,638,904
Deletion End158,625,145
Deletion Size13,760
Genome Build38
MGI IDMGI:1924748
NCBI Gene ID109275
BAC ID464K3
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 2

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF158,625,564158,625,586GGCAGTAGGGTATTGAACACAAG
TUP158,625,588158,625,611TCGTCAGCCTTGTGCTAGGAGCTA
TUR158,625,635158,625,655AGACAGCCCATCCTCTGGAAG
TDF158,638,194158,638,213CAAGCTGTGCAGGCCACTAC
TDP158,638,215158,638,237TGCTCAGCCGTGTCCCAGACAAT
TDR158,638,261158,638,280TCCAGGCCCTACCATGTTTC

PCR Primers

PrimerSequence
SUGATCTGCAAGGCTATGCAG
SDAACAGTGCAAAGAGCAGCAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR92 bp++-
TDFTDR87 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
16080A-G11VGB6C57BL/6NTac
16080A-G10VGB6C57BL/6NTac
16080A-A5VGB6C57BL/6NTac
16080A-H9VGB6C57BL/6NTac