16142   Syce1l     Status: ES cell colonies screened / QC positives

GeneSyce1l
Chromosome8
Deletion Start113,654,991
Deletion End113,643,240
Deletion Size11,752
Genome Build38
MGI IDMGI:1922247
NCBI Gene ID668110
BAC ID340K2
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 8

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF113,643,252113,643,271GAGCCTTTGATGGCGGAGTG
TUP113,643,274113,643,299TGGGAGCTGAGAAAGCTGAAGACACC
TUR113,643,307113,643,326TCTACCCTGTTGGCCTTCAC
TDF113,654,386113,654,406TGGTCCACCATCTCTGACTTG
TDP113,654,407113,654,430TTGGCATCTGACCACCCATGTTGA
TDR113,654,437113,654,456CCCGCATATCGTCCTCACTC

PCR Primers

PrimerSequence
SUGATGCTCTTAGCTGCCCAAG
SDTGTGGCTCCCTCAGTGTG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR75 bp++-
TDFTDR71 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
16142A-B1VGB6C57BL/6NTac
16142A-C3VGB6C57BL/6NTac
16142A-G2VGB6C57BL/6NTac
16142A-C8VGB6C57BL/6NTac