Gene | 4933417A18Rik |
Chromosome | 13 |
Deletion Start | 34,953,100 |
Deletion End | 34,924,540 |
Deletion Size | 28,561 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 13
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 34,924,790 | 34,924,810 | TGACATTACAGGTGCCCTCAG |
TUP | 34,924,812 | 34,924,837 | TCATGAGACGCTTGCCACATTATGGC |
TUR | 34,924,872 | 34,924,892 | GACCTCAACTCATGGGCAAAG |
TDF | 34,953,004 | 34,953,025 | CAAATAGTGCCAGGATGGTGAC |
TDP | 34,953,026 | 34,953,047 | AGCGATTCCCACAGCTGGGCCA |
TDR | 34,953,052 | 34,953,071 | GAAGCCTCTGGTTGCAGTAG |
PCR Primers
Primer | Sequence |
SU | TGTGCACACCAATCTCCTTC |
SD | TGGTCCTGAACTCACTGC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 103 bp | + | + | - |
TDF | TDR | 68 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
16256A-A9 | VGB6 | C57BL/6NTac | |
16256A-F11 | VGB6 | C57BL/6NTac | |
16256A-C4 | VGB6 | C57BL/6NTac | |
16256A-F4 | VGB6 | C57BL/6NTac | |
16256A-H8 | VGB6 | C57BL/6NTac | |