16303 Brwd1 Status: Cancelled
Gene | Brwd1 |
Chromosome | 16 |
Deletion Start | 96,082,299 |
Deletion End | 96,052,528 |
Deletion Size | 29,772 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 16
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 96,081,877 | 96,081,897 | GACGCCTTTCGTGTCTCATTC |
TUP | 96,081,852 | 96,081,876 | CAGCTGTTGCCGAAGAGGTTGGACT |
TUR | 96,081,825 | 96,081,844 | AGCTCCTGTTGTGCTCGTTG |
TDF | 96,053,444 | 96,053,465 | TGCTGGGAATAGAACTCAGGTG |
TDP | 96,053,420 | 96,053,442 | TCCGGAAGAGCAGACAGTGCTGA |
TDR | 96,053,395 | 96,053,417 | CTGGGCTAAGGGCTTGAAAGATG |
PCR Primers
Primer | Sequence |
SU | ACATCCGCGTCGTGCCAC |
SD | TCTAGACTCTGTGGGCAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 73 bp | + | + | - |
TDF | TDR | 71 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |