16375   Gypc     Status: ES cell colonies screened / QC positives

GeneGypc
Chromosome18
Deletion Start32,559,822
Deletion End32,529,941
Deletion Size29,882
Genome Build38
MGI IDMGI:1098566
NCBI Gene ID71683
BAC ID333H12
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 18

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF32,559,52032,559,540CAAGTCAAGTCAAGCGGTCAG
TUP32,559,49632,559,517TCAACTTCGCACCAGGGAGCCC
TUR32,559,44532,559,463GGGCCAGAAAGAGCTGTTG
TDF32,530,16832,530,186TGGCCTTGGTCCTGGTCTG
TDP32,530,14032,530,167CCTCCTCTTTCTCATGCTTCGCTACCTG
TDR32,530,09332,530,113TCTGTGCCTTTGGCCTCATTG

PCR Primers

PrimerSequence
SUTCTGATAGTGGCAGATGG
SDTCGTCTTGAGCTGCATGG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR96 bp++-
TDFTDR94 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
16375A-F1VGB6C57BL/6NTac
16375C-B11VGB6C57BL/6NTac