16697 Uty Status: ES cell colonies screened / QC no positives
Gene | Uty |
Chromosome | Y |
Deletion Start | 1,245,549 |
Deletion End | 1,224,501 |
Deletion Size | 21,049 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome Y
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 1,244,999 | 1,245,021 | CCGTTTCTCCTTTCTTGGCTTAC |
TUP | 1,244,974 | 1,244,998 | TTTCCTGATAGTTTGAGGCCCTGCC |
TUR | 1,244,950 | 1,244,969 | GCAGTGCTCTGGGCTGTATG |
TDF | 1,225,330 | 1,225,353 | TGGAACTTCAATTACAGGTGGTTG |
TDP | 1,225,307 | 1,225,329 | TGAGCCACCAGATGTGGGTGCTA |
TDR | 1,225,274 | 1,225,295 | CATTGCTCATGCCAAGGATCTG |
PCR Primers
Primer | Sequence |
SU | AGCTCTTAGGCTGACATCACG |
SD | CTAAGATACTTTTCATCCTC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 72 bp | + | + | - |
TDF | TDR | 80 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |