16741   Colq     Status: ES cell colonies screened / QC positives

GeneColq
Chromosome14
Deletion Start31,547,485
Deletion End31,524,375
Deletion Size23,111
Genome Build38
MGI IDMGI:1338761
NCBI Gene ID382864
BAC ID132G20
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 14

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF31,546,78631,546,807GCAGAGGACTTGTGGTCAGTTC
TUP31,546,76431,546,785CCAGCACCTCCACTGTGGCTCA
TUR31,546,69631,546,715CACACCTGGCATCCACAGAG
TDF31,524,51731,524,534TGCCCACTGTGCTGTCTG
TDP31,524,48731,524,512CCCTGCCCTGAGCAGTATCTTTGCCT
TDR31,524,45831,524,477GCACCGAAGGTCTCCGTATG

PCR Primers

PrimerSequence
SUACAGGAAGCAAGGGACAGTG
SDAGTGCTAAGCCAAATCCACG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR112 bp++-
TDFTDR77 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
16741A-C8VGB6C57BL/6NTac
16741A-F12VGB6C57BL/6NTac