16845   Arih2     Status: ES cell colonies screened / QC positives

GeneArih2
Chromosome9
Deletion Start108,644,274
Deletion End108,611,637
Deletion Size32,638
Genome Build38
MGI IDMGI:1344361
NCBI Gene ID23807
BAC ID423B20
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 9

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF108,643,562108,643,586CTGCTGTGATGAAATGATGTGTATC
TUP108,643,514108,643,543ACAACTGTTTGATAGTACCCAGATGCCCTG
TUR108,643,469108,643,490GAACCACCAGTACACCTGAAAC
TDF108,612,003108,612,023GGGCTTCGTTTGACTCCTTTC
TDP108,611,964108,611,992AGTACCGTCCAAGAGGTTTAAGGAGACAC
TDR108,611,941108,611,960TCTCAACGGACTCCCACAAG

PCR Primers

PrimerSequence
SUTTCAGGACTTAGAGGCAGATG
SDAGCACCCATGACCAGTTC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR118 bp++-
TDFTDR83 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
16845A-E5VGB6C57BL/6NTac
16845A-G2VGB6C57BL/6NTac
16845A-E4VGB6C57BL/6NTac