16876   Hoxb4     Status: Cancelled

GeneHoxb4
Chromosome11
Deletion Start96,320,368
Deletion End96,318,773
Deletion Size1,596
Genome Build38
MGI IDMGI:96185
NCBI Gene ID15412
BAC ID262I23
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 11

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF96,319,16296,319,180CCACTCCGCGTGCAAAGAG
TUP96,319,18196,319,203CCCGTCGTCTACCCCTGGATGCG
TUR96,319,26796,319,285TCGGAGGTCCCTTCACTGT
TDF96,320,07796,320,094TACACTCGCCAGCAGGTC
TDP96,320,10296,320,131TGGAGAAGGAGTTTCACTACAATCGCTACC
TDR96,320,20396,320,222CACTTCATGCGCCGATTCTG

PCR Primers

PrimerSequence
SUAACAGGCCCTCCAATTAACC
SDGGCGCAGCAGACTCCTCC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR124 bp++-
TDFTDR146 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
16876A-A12VGB6C57BL/6NTac
16876A-B5VGB6C57BL/6NTac
16876A-E11VGB6C57BL/6NTac
16876A-B4VGB6C57BL/6NTac
16876A-H3VGB6C57BL/6NTac