17038   Pcp4     Status: ES cell colonies screened / QC positives

GenePcp4
Chromosome16
Deletion Start96,493,863
Deletion End96,467,785
Deletion Size26,079
Genome Build38
MGI IDMGI:97509
NCBI Gene ID18546
BAC ID136D7
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 16

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF96,468,09596,468,115TTGTGCTTTCTCCAGGGAGTG
TUP96,468,11696,468,142CGTCCTCACGTGTTTCCTTGGGATACA
TUR96,468,17096,468,189GAGACCGGATTTCCCAGGTG
TDF96,493,53396,493,552ACCCTCGCTGTCTGGCTTTC
TDP96,493,56296,493,589CCTGAGTTGTATTCAGCCAGTAGTGGGC
TDR96,493,59896,493,616GAGTCAACTGCCACCTTCC

PCR Primers

PrimerSequence
SUTTTGGTGTGCAGCAAATTC
SDCTCACCAACCCTAATGAAGG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR95 bp++-
TDFTDR84 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17038B-A2VGB6C57BL/6NTac
17038B-B11VGB6C57BL/6NTac
17038C-A9VGB6C57BL/6NTac
17038C-C9VGB6C57BL/6NTac
17038C-G4VGB6C57BL/6NTac