17044   Cntfr     Status: ES cell colonies screened / QC positives

GeneCntfr
Chromosome4
Deletion Start41,675,101
Deletion End41,658,140
Deletion Size16,963
Genome Build38
MGI IDMGI:99605
NCBI Gene ID12804
BAC ID119N7
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 4

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF41,674,84541,674,865CAGGCTGACCCACCAATTCTC
TUP41,674,81941,674,843CAGGCACTACCCTCATCTGGGTGGT
TUR41,674,75641,674,779GACCCTCTACCTTCCTTCCCTATG
TDF41,658,89641,658,918ACGCAGGGAAGGAATACATCATC
TDP41,658,87341,658,895CAGGTGGCAGCCAAGGACAATGA
TDR41,658,85241,658,872CAGTCACTCCATGTCCCAATC

PCR Primers

PrimerSequence
SUAAGGCGATCTAGAGACGTGC
SDCAACAAAGACCCTGGGACAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR110 bp++-
TDFTDR67 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17044A-B11VGB6C57BL/6NTac
17044B-C2VGB6C57BL/6NTac
17044B-D8VGB6C57BL/6NTac