Gene | 2010107E04Rik |
Chromosome | 12 |
Deletion Start | 111,963,350 |
Deletion End | 111,961,456 |
Deletion Size | 1,895 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 12
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 111,962,959 | 111,962,976 | TACCTGCTGAGCCACCTG |
TUP | 111,962,929 | 111,962,957 | CTGGTCCATAACGTGGCCTTAGATGTTCC |
TUR | 111,962,868 | 111,962,888 | GCTCTCCCAACAAGGGCTATG |
TDF | 111,961,543 | 111,961,566 | CTGTACCACTTGTTCCTCTCCTTG |
TDP | 111,961,519 | 111,961,541 | AAGGTCCTGCACCTGCCCATGGC |
TDR | 111,961,493 | 111,961,513 | TTGTGGATTCGGAGCAGTTAG |
PCR Primers
Primer | Sequence |
SU | ACATCTGACCGTGGTGTGTG |
SD | GGCAGAAGCAGAACCACTTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 109 bp | + | + | - |
TDF | TDR | 74 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17082A-A2 | VGB6 | C57BL/6NTac | |
17082A-A4 | VGB6 | C57BL/6NTac | |
17082A-A6 | VGB6 | C57BL/6NTac | |
17082A-B10 | VGB6 | C57BL/6NTac | |
17082A-F12 | VGB6 | C57BL/6NTac | |