17090   Abca8b     Status: ES cell colonies screened / QC positives

GeneAbca8b
Chromosome11
Deletion Start109,981,770
Deletion End109,952,557
Deletion Size29,214
Genome Build38
MGI IDMGI:1351668
NCBI Gene ID27404
BAC ID154O1
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 11

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF109,981,374109,981,393GAACTGGTTGCCAAGGTGAC
TUP109,981,345109,981,370AGGTGAGAGCAGCACTGTAGACAACA
TUR109,981,292109,981,310TGACTGCCTGTGCTGAGAC
TDF109,952,649109,952,669TGCAACACCAAGAGACTGAAC
TDP109,952,622109,952,648TGCTTCCCAGTTCTGATGGACATCCTG
TDR109,952,575109,952,592GTTTGGATGCGGGCTGAC

PCR Primers

PrimerSequence
SUACAGCTTAGGAGACCTTGCC
SDCCTTCGTATTAATCACAGTAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR102 bp++-
TDFTDR95 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17090A-A12VGB6C57BL/6NTac
17090A-F5VGB6C57BL/6NTac
17090A-H9VGB6C57BL/6NTac
17090A-B11VGB6C57BL/6NTac
17090A-C1VGB6C57BL/6NTac