Gene | Abcb10 |
Chromosome | 8 |
Deletion Start | 123,982,810 |
Deletion End | 123,954,287 |
Deletion Size | 28,524 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 8
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 123,982,017 | 123,982,035 | GAGCTTTGTGCTGGCTGTC |
TUP | 123,981,987 | 123,982,013 | TCCCTAAGTGGTGACTTGGTCAGGACC |
TUR | 123,981,938 | 123,981,958 | CTATCCGGCTGAGTTACTGTC |
TDF | 123,954,510 | 123,954,529 | CGGCTGATGGAAGGGAGAAC |
TDP | 123,954,486 | 123,954,507 | TGCTGATCATAGCCCACCGCCT |
TDR | 123,954,444 | 123,954,464 | TGGTCAAGGACAGCAACAAAG |
PCR Primers
Primer | Sequence |
SU | AGGTTCACAAGTCGTGGAGG |
SD | TCAAACTTTCCCTCAGTGGC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 98 bp | + | + | - |
TDF | TDR | 86 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17091A-C5 | VGB6 | C57BL/6NTac | |
17091B-F7 | VGB6 | C57BL/6NTac | |
17091C-F1 | VGB6 | C57BL/6NTac | |
17091C-F6 | VGB6 | C57BL/6NTac | |