17108   Chrna4     Status: ES cell colonies screened / QC positives

GeneChrna4
Chromosome2
Deletion Start181,039,070
Deletion End181,024,665
Deletion Size14,406
Genome Build38
MGI IDMGI:87888
NCBI Gene ID11438
BAC ID383E16
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 2

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF181,038,720181,038,740GCATTTCGGAGCTGGAATCAG
TUP181,038,688181,038,716CTCCAAGTAGGATAGAGGTGGAGTCCACC
TUR181,038,653181,038,673AAGGCGAGATTTGGCTGGATG
TDF181,024,868181,024,886TTTGCAGGTGAAGGAGGAC
TDP181,024,838181,024,864AAATACGTGGCCATGGTCATTGACCGA
TDR181,024,800181,024,823CCCAGAAGGCAGACAATGATGAAC

PCR Primers

PrimerSequence
SUCCGAGATGACTGGAATGACC
SDTTTGAGTCAGAGAGCAGCCC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR88 bp++-
TDFTDR87 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17108A-A3VGB6C57BL/6NTac
17108A-E6VGB6C57BL/6NTac
17108A-E11VGB6C57BL/6NTac
17108A-E10VGB6C57BL/6NTac
17108A-G2VGB6C57BL/6NTac