17113   Cx3cl1     Status: Germline transmission achieved

GeneCx3cl1
Chromosome8
Deletion Start94,780,569
Deletion End94,772,268
Deletion Size8,302
Genome Build38
MGI IDMGI:1097153
NCBI Gene ID20312
BAC ID243I19
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 8

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF94,772,99094,773,011CCATTCCACCTCCTTTAACCTC
TUP94,773,01294,773,035TAGAGCTCCATCCTCAGGGAGGGC
TUR94,773,06694,773,086CCACCTTCTCTGAGCGACAAC
TDF94,779,67194,779,692CAAGTTTGAGAAGCGGGTGGAC
TDP94,779,69794,779,719TGACACCTGGGATCACCTTGGCC
TDR94,779,74694,779,765TGGCGGATTCAGGCTTTGTC

PCR Primers

PrimerSequence
SUTAACCCTGCTAACCCACCAG
SDACATAGGGCAGATAGCACCG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR97 bp++-
TDFTDR95 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17113A-E4VGB6C57BL/6NTac
17113C-F3VGB6C57BL/6NTac
17113C-C9VGB6C57BL/6NTac