Gene | Frzb |
Chromosome | 2 |
Deletion Start | 80,446,837 |
Deletion End | 80,413,271 |
Deletion Size | 33,567 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 80,446,706 | 80,446,724 | CATCCCGCTGTGCAAGTCC |
TUP | 80,446,679 | 80,446,703 | TCCCTGGAACATGACCAAGATGCCC |
TUR | 80,446,648 | 80,446,666 | CGTTAGCCTGGGTGCTGTG |
TDF | 80,413,387 | 80,413,407 | TCAGAAGTCTGGCAGGAACTC |
TDP | 80,413,360 | 80,413,381 | CCCGGCCAGCACGCAGCTAAAT |
TDR | 80,413,306 | 80,413,326 | CAGCAGCGCCAGTCTTAGAAG |
PCR Primers
Primer | Sequence |
SU | TCTCTGGCTTCCTCTTCTGC |
SD | ATGGCCAAAGGCATACAAAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 77 bp | + | + | - |
TDF | TDR | 102 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17120A-G5 | VGB6 | C57BL/6NTac | |
17120A-A10 | VGB6 | C57BL/6NTac | |
17120A-B3 | VGB6 | C57BL/6NTac | |
17120A-G12 | VGB6 | C57BL/6NTac | |
17120A-H8 | VGB6 | C57BL/6NTac | |
17120A-E10 | VGB6 | C57BL/6NTac | |