Gene | Il4i1 |
Chromosome | 7 |
Deletion Start | 44,840,707 |
Deletion End | 44,836,528 |
Deletion Size | 4,180 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 7
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 44,837,177 | 44,837,198 | TTAAGCTGGGAAGTCCCTCTAC |
TUP | 44,837,201 | 44,837,228 | TCCATCTGCTAGTCTTCCTGCTACAGTC |
TUR | 44,837,233 | 44,837,252 | GCTGCTCGGAAAGAAAGGTC |
TDF | 44,840,437 | 44,840,459 | AAGAAGTCAGCCCAGATGAACAG |
TDP | 44,840,461 | 44,840,487 | AGCCCTCTCACAAACACTTGTTGGTGG |
TDR | 44,840,516 | 44,840,534 | GGGAATGGCCTCCACAAAC |
PCR Primers
Primer | Sequence |
SU | CCAGCATCTGACCCTAGCTC |
SD | CTCCTAGAGGTCCGGGATTC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 76 bp | + | + | - |
TDF | TDR | 98 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17131A-A2 | VGB6 | C57BL/6NTac | |
17131A-B7 | VGB6 | C57BL/6NTac | |
17131A-H10 | VGB6 | C57BL/6NTac | |
17131A-D9 | VGB6 | C57BL/6NTac | |