Gene | Pla2g10 |
Chromosome | 16 |
Deletion Start | 13,730,408 |
Deletion End | 13,715,434 |
Deletion Size | 14,975 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 16
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 13,730,091 | 13,730,111 | CCCATAGTTACTGCGGTCCTC |
TUP | 13,730,068 | 13,730,090 | TCCAGCAGCCTGAAGCTCCTAGC |
TUR | 13,730,033 | 13,730,055 | AAGTGATAGCCAGTTCACATGAC |
TDF | 13,715,619 | 13,715,640 | CCTCTGAGTCTCTGCTCTAACC |
TDP | 13,715,587 | 13,715,614 | TTTCCATACTTCTTCCAGGACCAGCAGA |
TDR | 13,715,541 | 13,715,559 | AGCCAGCTCCTCGTCACAC |
PCR Primers
Primer | Sequence |
SU | AGCGTCAGCAGCATCTTTAC |
SD | CCAAGCCTAAGCAGGTGTTC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 79 bp | + | + | - |
TDF | TDR | 100 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17168A-A4 | VGB6 | C57BL/6NTac | |
17168A-B4 | VGB6 | C57BL/6NTac | |
17168A-C9 | VGB6 | C57BL/6NTac | |
17168A-E4 | VGB6 | C57BL/6NTac | |
17168A-F5 | VGB6 | C57BL/6NTac | |
17168A-D4 | VGB6 | C57BL/6NTac | |