17238   Atp6v0a4     Status: Germline transmission achieved

GeneAtp6v0a4
Chromosome6
Deletion Start38,094,051
Deletion End38,071,854
Deletion Size22,198
Genome Build38
MGI IDMGI:2153480
NCBI Gene ID140494
BAC ID359J15
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 6

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF38,093,22938,093,247GGTGCTCACGAGGCCATAG
TUP38,093,20338,093,225TTGGGTCCGCTGAGTTACATGGC
TUR38,093,15138,093,175GTGCTTGTTAGTCTTGCTTGTTAGG
TDF38,072,40338,072,423GCTTTCCCTAGCAGATGTGAC
TDP38,072,37238,072,398AGAAGCCCAACTGTGCTTTGTCTCTGT
TDR38,072,31838,072,336CGCTGGCCTCTGTCCTATC

PCR Primers

PrimerSequence
SUTTTGGGTTTGATGATGTTGG
SDCACAACCAGTTCAGCTACTG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR97 bp++-
TDFTDR106 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17238A-B3VGB6C57BL/6NTac
17238A-H3VGB6C57BL/6NTac