17273   Kcnj1     Status: Germline transmission achieved

GeneKcnj1
Chromosome9
Deletion Start32,397,501
Deletion End32,396,345
Deletion Size1,157
Genome Build38
MGI IDMGI:1927248
NCBI Gene ID56379
BAC ID90A7
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 9

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF32,396,53032,396,551CGTGTTCATCACAGCCTTCTTG
TUP32,396,55832,396,587TGGTTTCTCTTTGGTCTCCTGTGGTATGTC
TUR32,396,62032,396,638ACGGTTGTCAGGTGGGTAG
TDF32,397,27932,397,301CCAAGGAAGGGAAATACCGAGTG
TDP32,397,30732,397,336CCATAACTTTGGTAAGACGGTGGAAGTGGA
TDR32,397,34232,397,363TAGAGGCACATGGCACAATGAG

PCR Primers

PrimerSequence
SUGCACAGGTTATAATGGGTCACTC
SDTTTCCATCAACACTGTACGAGC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR109 bp++-
TDFTDR85 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17273A-H4VGB6C57BL/6NTac
17273A-A3VGB6C57BL/6NTac
17273A-A10VGB6C57BL/6NTac
17273A-G9VGB6C57BL/6NTac
17273A-A2VGB6C57BL/6NTac