17276   Vnn3     Status: ES cell colonies screened / QC positives

GeneVnn3
Chromosome10
Deletion Start23,904,719
Deletion End23,851,587
Deletion Size53,133
Genome Build38
MGI IDMGI:1347055
NCBI Gene ID26464
BAC ID460I13
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 10

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF23,851,99323,852,013ACCAGACCCTGAAGTGAACTG
TUP23,852,01723,852,043TCCCTGTAGAGACCCTAGGAGGTAACA
TUR23,852,09423,852,113GCCTGGTGACATTACTGCTC
TDF23,904,53823,904,559GGGCTCTTTGGGAGGTTGTATG
TDP23,904,56323,904,588AGGACTGGGCATCCAATGCTTCCTCA
TDR23,904,58923,904,609CAGCGAGTGTGCTATGAAGTC

PCR Primers

PrimerSequence
SUCTCAACTGGTTGGTTCAGTG
SDCTTATGATGGTTTGAAGTGCC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR121 bp++-
TDFTDR72 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17276A-E10VGB6C57BL/6NTac
17276A-H4VGB6C57BL/6NTac
17276A-C9VGB6C57BL/6NTac