17300   Agpat3     Status: ES cell colonies screened / QC positives

GeneAgpat3
Chromosome10
Deletion Start78,288,021
Deletion End78,273,615
Deletion Size14,407
Genome Build38
MGI IDMGI:1336186
NCBI Gene ID28169
BAC ID423I19
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 10

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF78,287,68578,287,705TCTGGTTCCCTGAGGTCATAC
TUP78,287,65978,287,682TTCCAGGGTCATGTGAACAGGTGC
TUR78,287,62878,287,649CATGTGGTTGAGCCTGGTAAAG
TDF78,274,06478,274,085GTTCGTGGGAGCAGGTAAAGAG
TDP78,274,03778,274,055TGCCCGCTCACATGCTGGG
TDR78,274,01878,274,036GTATGGGTGGCCCAGTGAC

PCR Primers

PrimerSequence
SUCCATTCATTCAGCCTTCCTG
SDGAAGCTAAGGTGCCAAGCAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR78 bp++-
TDFTDR68 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17300A-A10VGB6C57BL/6NTac
17300A-H10VGB6C57BL/6NTac
17300A-F4VGB6C57BL/6NTac
17300A-D12VGB6C57BL/6NTac