17325   Ccdc40     Status: ES cell colonies screened / QC positives

GeneCcdc40
Chromosome11
Deletion Start119,264,610
Deletion End119,231,587
Deletion Size33,024
Genome Build38
MGI IDMGI:2443893
NCBI Gene ID207607
BAC ID273O5
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 11

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUFCCTCAGAAACAGACGTGGACTC
TUPTAGGAAGGCCCTCCGAGGAATAGAC
TURGGCGGATAGGCAACTGTGATAG
TDFGGGCAGACCATCAAGAGTAGAC
TDPAGAGCCCGGCAGTGGTAGCACAC
TDRTGGCCTGGAACTCAGAAATC

PCR Primers

PrimerSequence
SUGATAACACGCCAACCCTCAC
SDTCGGTCTTTGGGTTTCTGTC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17325A-G10VGB6C57BL/6NTac
17325A-C4VGB6C57BL/6NTac
17325A-F10VGB6C57BL/6NTac
17325A-F2VGB6C57BL/6NTac
17325A-E2VGB6C57BL/6NTac
17325A-E1VGB6C57BL/6NTac