17354   Ehd1     Status: ES cell colonies screened / QC positives

GeneEhd1
Chromosome19
Deletion Start6,298,643
Deletion End6,276,978
Deletion Size21,666
Genome Build38
MGI IDMGI:1341878
NCBI Gene ID13660
BAC ID392C8
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 19

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF6,277,1386,277,157TCGACAACAAGCCGATGGTG
TUP6,277,1596,277,180TCCTGGTCGGCCAGTACAGCAC
TUR6,277,1936,277,212CGATCAGGTGGCGGATGAAG
TDF6,298,4696,298,487GGATGGCCTGCTGGATGAC
TDP6,298,4896,298,511AGGAGTTTGCCCTGGCCAACCAC
TDR6,298,5516,298,573GGAATGAGATGTGGAGGAAGGTC

PCR Primers

PrimerSequence
SUCTCGACGAGGTTCGCGCGA
SDAGGTGCCTGGCTTGGATAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR75 bp++-
TDFTDR105 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17354A-D10VGB6C57BL/6NTac
17354A-H1VGB6C57BL/6NTac
17354A-H9VGB6C57BL/6NTac