Gene | Frmd8 |
Chromosome | 19 |
Deletion Start | 5,874,791 |
Deletion End | 5,852,581 |
Deletion Size | 22,211 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 19
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 5,874,727 | 5,874,745 | CCCACCGAAGTAGCGTCTC |
TUP | 5,874,695 | 5,874,723 | AGTGGGTGCCCGAGGTAGGTCTCTACTTT |
TUR | 5,874,655 | 5,874,674 | CCCAGGCTGGAACCAAAGAG |
TDF | 5,852,997 | 5,853,017 | GCTTCCCATCCTCAGCTATCC |
TDP | 5,852,972 | 5,852,995 | TGTCTTAGTGGTCGTCACCCAGCA |
TDR | 5,852,947 | 5,852,967 | AAGCTCCAGAAGACTCCAGAC |
PCR Primers
Primer | Sequence |
SU | ATTCTGGAGTGAGGCAGTGG |
SD | ACCGAAGGCAAACACTGAAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 91 bp | + | + | - |
TDF | TDR | 71 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17364A-A12 | VGB6 | C57BL/6NTac | |
17364A-B7 | VGB6 | C57BL/6NTac | |
17364A-C3 | VGB6 | C57BL/6NTac | |
17364A-C6 | VGB6 | C57BL/6NTac | |
17364A-H6 | VGB6 | C57BL/6NTac | |