17380   Grpel1     Status: ES cell colonies screened / QC positives

GeneGrpel1
Chromosome5
Deletion Start36,471,477
Deletion End36,465,197
Deletion Size6,281
Genome Build38
MGI IDMGI:1334417
NCBI Gene ID17713
BAC ID93H13
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 5

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF36,465,31736,465,334TTAGCGGCAGGACTGGTC
TUP36,465,34336,465,364CGGTGCCCGTGCACCCTGAAGT
TUR36,465,36536,465,385GGACTCGATGGTGAGGATGTG
TDF36,471,05236,471,069GCAGGCATCCAGGGTTTC
TDP36,471,07236,471,097CAAGGACTTGCTGGAGGTTGCAGACA
TDR36,471,11736,471,138GATCTCCTCCTTTGGAACACTC

PCR Primers

PrimerSequence
SUTAGCAGGAGCCTAAAGCGAG
SDAAGTGTTCCTGCTCTGGCTC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR69 bp++-
TDFTDR87 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17380A-A2VGB6C57BL/6NTac
17380A-G1VGB6C57BL/6NTac
17380A-G3VGB6C57BL/6NTac
17380A-G5VGB6C57BL/6NTac