17389   Hspd1     Status: ES cell colonies screened / QC positives

GeneHspd1
Chromosome1
Deletion Start55,086,936
Deletion End55,078,190
Deletion Size8,747
Genome Build38
MGI IDMGI:96242
NCBI Gene ID15510
BAC ID289O14
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 1

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF55,086,16455,086,185GGTTGCTGGGATTTGAAGGTTG
TUP55,086,14055,086,162TGGGACCTTCGGAAGAGCAGTCA
TUR55,086,11455,086,134AAAGATGGCTCAGCGGGTAAG
TDF55,078,54355,078,565GAACATGGTGGAAAAAGGGATCA
TDP55,078,51555,078,538TCCAACAAAGGTAAGTGATTCAGC
TDR55,078,48255,078,502TGCAGAGAGCAAGACATCCAG

PCR Primers

PrimerSequence
SUGCATTTAGAACCTGCCTTGC
SDCATCAAGACCATGGAAAGGG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR72 bp++-
TDFTDR84 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17389A-H10VGB6C57BL/6NTac
17389A-A8VGB6C57BL/6NTac
17389A-A9VGB6C57BL/6NTac
17389A-H8VGB6C57BL/6NTac
17389A-F9VGB6C57BL/6NTac
17389A-E11VGB6C57BL/6NTac