17399   Magix     Status: ES cell colonies screened / QC positives

GeneMagix
ChromosomeX
Deletion Start7,680,995
Deletion End7,674,900
Deletion Size6,096
Genome Build38
MGI IDMGI:1859644
NCBI Gene ID54634
BAC ID375H9
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome X

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF7,680,2887,680,309TGTTGAGTGCTCAGAGGTGTTC
TUP7,680,2567,680,284TCTATTGCTGTCAAATGGCTACCTTCGGG
TUR7,680,2277,680,244CATTGCCCGCTGCCTTAC
TDF7,675,2137,675,237TGTCTATTCCACCACCCAATCTAAC
TDP7,675,1837,675,209TAGTCTTGCTATCTCCAGATCGCAGCC
TDR7,675,1537,675,171GAGACTCCACCCTGCTTCC

PCR Primers

PrimerSequence
SUGTCTCCAGTTAAGAGAAGCAG
SDCGAAGGGACTTCATCGAAAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR83 bp++-
TDFTDR85 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17399A-B8VGB6C57BL/6NTac
17399A-C7VGB6C57BL/6NTac
17399A-D2VGB6C57BL/6NTac
17399A-D8VGB6C57BL/6NTac
17399A-E5VGB6C57BL/6NTac
17399A-F12VGB6C57BL/6NTac