Gene | Mrvi1 |
Chromosome | 7 |
Deletion Start | 110,945,889 |
Deletion End | 110,921,319 |
Deletion Size | 24,571 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 7
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 110,945,774 | 110,945,795 | GGGCCAAACTAAGCATTCTGTC |
TUP | 110,945,750 | 110,945,773 | TGAGGCCACAGCTTACAGACTGGC |
TUR | 110,945,686 | 110,945,705 | TCAGAGGGAAAGCCACACAC |
TDF | 110,922,259 | 110,922,281 | AGTCTTGGTCTTCTGTGATGTTC |
TDP | 110,922,230 | 110,922,258 | TGGGCTGGAGGCTTAGAAAGATGAACAAT |
TDR | 110,922,205 | 110,922,224 | ATTGGAGGGTGGGAGTTCTG |
PCR Primers
Primer | Sequence |
SU | ACAAAGCCAGAAAGCAGGAG |
SD | GCAATGTCAAAAGTTCAGGC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 110 bp | + | + | - |
TDF | TDR | 77 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17411A-E10 | VGB6 | C57BL/6NTac | |
17411A-C12 | VGB6 | C57BL/6NTac | |
17411A-E7 | VGB6 | C57BL/6NTac | |
17411A-D1 | VGB6 | C57BL/6NTac | |
17411A-B9 | VGB6 | C57BL/6NTac | |
17411A-D4 | VGB6 | C57BL/6NTac | |