17439   Pacsin3     Status: ES cell colonies screened / QC positives

GenePacsin3
Chromosome2
Deletion Start91,264,319
Deletion End91,260,211
Deletion Size4,109
Genome Build38
MGI IDMGI:1891410
NCBI Gene ID80708
BAC ID275M14
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 2

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF91,260,48391,260,502AACGTGCCCGCATTGAGAAG
TUP91,260,50491,260,523CCTACGCCCAGCAGCTGGCT
TUR91,260,59291,260,613GGTCCCACCCTCATAACCTTTG
TDF91,263,95491,263,974GACGAAGAAAGCCAGGGACTC
TDP91,263,97791,263,999TCCTCACAGGCTGCTCAGGGTCC
TDR91,264,08191,264,101GGCCGACAAACTGGAGGATAC

PCR Primers

PrimerSequence
SUACCAGTCTGGCATTCTCAGC
SDCTCCCACCAGCAAGAGTAGG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR131 bp++-
TDFTDR148 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17439A-B10VGB6C57BL/6NTac
17439A-C1VGB6C57BL/6NTac
17439A-D1VGB6C57BL/6NTac
17439A-H6VGB6C57BL/6NTac
17439A-E1VGB6C57BL/6NTac
17439A-G4VGB6C57BL/6NTac