17445   Pcx     Status: ES cell colonies screened / QC positives

GenePcx
Chromosome19
Deletion Start4,621,322
Deletion End4,601,603
Deletion Size19,720
Genome Build38
MGI IDMGI:97520
NCBI Gene ID18563
BAC ID132H19
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 19

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF4,602,2364,602,255TGGCTATGGGTTCCTCTCAG
TUP4,602,2584,602,279CGAGCAGACTTTGCCCAGGCCT
TUR4,602,2824,602,301AACCGGACTCCAGCATCTTG
TDF4,620,9404,620,960AAAGACACCCAGGCCATGAAG
TDP4,620,9644,620,987TAGTGCCACCAGAGCCAGTCAGGT
TDR4,621,0114,621,034GACAGGACAGAGACGACATAAGAC

PCR Primers

PrimerSequence
SUGAGGTTCGTGGAGAATGAGG
SDTTGAGCAAATTTCCCAGGAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR66 bp++-
TDFTDR95 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17445A-A6VGB6C57BL/6NTac
17445A-B11VGB6C57BL/6NTac
17445A-H9VGB6C57BL/6NTac
17445A-D2VGB6C57BL/6NTac
17445A-D7VGB6C57BL/6NTac
17445A-D6VGB6C57BL/6NTac