Gene | Crh |
Chromosome | 3 |
Deletion Start | 19,694,473 |
Deletion End | 19,693,831 |
Deletion Size | 643 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 3
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 19,694,333 | 19,694,350 | TTCTTGCAGCCGGAGCAG |
TUP | 19,694,310 | 19,694,331 | CCCAGCAACCTCAGCCGGTTCT |
TUR | 19,694,251 | 19,694,273 | CAGCGGGACTTCTGTTGAGATTC |
TDF | 19,693,982 | 19,694,002 | CTGCGGGAAGTCTTGGAAATG |
TDP | 19,693,959 | 19,693,980 | CCCGGGCAGAGCAGTTAGCTCA |
TDR | 19,693,930 | 19,693,951 | CCATCAGTTTCCTGTTGCTGTG |
PCR Primers
Primer | Sequence |
SU | GGGAAGTCGGTTTAGGGAAG |
SD | CACAACCAAATTGACCAAGAATC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 100 bp | + | + | - |
TDF | TDR | 73 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17526A-A11 | VGB6 | C57BL/6NTac | |
17526B-F7 | VGB6 | C57BL/6NTac | |