Gene | Ntf5 |
Chromosome | 7 |
Deletion Start | 45,416,128 |
Deletion End | 45,415,449 |
Deletion Size | 680 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 7
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 45,415,538 | 45,415,556 | CCCATTTCTGGCCCCTGAG |
TUP | 45,415,557 | 45,415,577 | TGGGACCTCTTGTCTCCCCGA |
TUR | 45,415,617 | 45,415,634 | GGCCTCCAGCAGGAAGAG |
TDF | 45,415,950 | 45,415,971 | TGCAAGGCTAAGCAGTCCTATG |
TDP | 45,415,974 | 45,415,995 | CGGGCGTTGACTGCAGACTCCC |
TDR | 45,416,015 | 45,416,035 | GCTGTGTCGATCCGAATCCAG |
PCR Primers
Primer | Sequence |
SU | ACTTCTTGGCTGTGTGACCC |
SD | ATGATGTTCAGGATGGAGCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 97 bp | + | + | - |
TDF | TDR | 86 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17529A-B8 | VGB6 | C57BL/6NTac | |
17529A-E1 | VGB6 | C57BL/6NTac | |
17529A-F11 | VGB6 | C57BL/6NTac | |
17529A-G4 | VGB6 | C57BL/6NTac | |
17529A-G10 | VGB6 | C57BL/6NTac | |
17529A-A7 | VGB6 | C57BL/6NTac | |