Gene | Pten |
Chromosome | 19 |
Deletion Start | 32,776,094 |
Deletion End | 32,758,448 |
Deletion Size | 17,647 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 19
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 32,758,493 | 32,758,516 | CAAGAGGATGGATTCGACTTAGAC |
TUP | 32,758,518 | 32,758,543 | TGACCTGTATCCATTTCTGCGGCTGT |
TUR | 32,758,558 | 32,758,579 | TCCCACGTTATCAGAGTGACAG |
TDF | 32,775,783 | 32,775,806 | AGCTGTCAGGGATGAGGTTATCAC |
TDP | 32,775,810 | 32,775,831 | CCGCCGAGTCACTGTGGGCAGT |
TDR | 32,775,846 | 32,775,868 | TCAGCCACTCACTATCCTTAGAC |
PCR Primers
Primer | Sequence |
SU | TGCGAGGATTATCCGTCTTC |
SD | GAGAATAACCTGGTAAGAGAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 87 bp | + | + | - |
TDF | TDR | 86 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17539A-H11 | VGB6 | C57BL/6NTac | |
17539A-F11 | VGB6 | C57BL/6NTac | |