Gene | Map2k3 |
Chromosome | 11 |
Deletion Start | 60,951,931 |
Deletion End | 60,932,226 |
Deletion Size | 19,706 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 60,932,655 | 60,932,675 | CAATGCCGGAAACCTGTCTAC |
TUP | 60,932,677 | 60,932,702 | CAGAGCTCCTCCACTCTTCCAACTCC |
TUR | 60,932,706 | 60,932,729 | GGCAAAGGAGGATTCACAAGGATG |
TDF | 60,951,132 | 60,951,153 | CCTGTCTTCACTGCCCTCTTTC |
TDP | 60,951,156 | 60,951,180 | AGCCTAAGGAAGAACCCTGCAGAGC |
TDR | 60,951,192 | 60,951,212 | CACACTCACCATCAGCTCCAG |
PCR Primers
Primer | Sequence |
SU | GAGTGGGTAGGGCAGTCATC |
SD | GGCCACAGTGTACGAAGTCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 75 bp | + | + | - |
TDF | TDR | 81 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17640A-A1 | VGB6 | C57BL/6NTac | |
17640A-D12 | VGB6 | C57BL/6NTac | |
17640A-C3 | VGB6 | C57BL/6NTac | |
17640A-B2 | VGB6 | C57BL/6NTac | |
17640A-C4 | VGB6 | C57BL/6NTac | |
17640A-F7 | VGB6 | C57BL/6NTac | |