17640   Map2k3     Status: ES cell colonies screened / QC positives

GeneMap2k3
Chromosome11
Deletion Start60,951,931
Deletion End60,932,226
Deletion Size19,706
Genome Build38
MGI IDMGI:1346868
NCBI Gene ID26397
BAC ID33K13
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 11

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF60,932,65560,932,675CAATGCCGGAAACCTGTCTAC
TUP60,932,67760,932,702CAGAGCTCCTCCACTCTTCCAACTCC
TUR60,932,70660,932,729GGCAAAGGAGGATTCACAAGGATG
TDF60,951,13260,951,153CCTGTCTTCACTGCCCTCTTTC
TDP60,951,15660,951,180AGCCTAAGGAAGAACCCTGCAGAGC
TDR60,951,19260,951,212CACACTCACCATCAGCTCCAG

PCR Primers

PrimerSequence
SUGAGTGGGTAGGGCAGTCATC
SDGGCCACAGTGTACGAAGTCC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR75 bp++-
TDFTDR81 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17640A-A1VGB6C57BL/6NTac
17640A-D12VGB6C57BL/6NTac
17640A-C3VGB6C57BL/6NTac
17640A-B2VGB6C57BL/6NTac
17640A-C4VGB6C57BL/6NTac
17640A-F7VGB6C57BL/6NTac