Gene | Nfe2 |
Chromosome | 15 |
Deletion Start | 103,251,039 |
Deletion End | 103,248,407 |
Deletion Size | 2,633 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 15
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 103,250,358 | 103,250,378 | CACCCAGGGAATGGCAAAGTC |
TUP | 103,250,321 | 103,250,350 | TGACCCTTTGACTCTAGATAGCCACAGCAG |
TUR | 103,250,239 | 103,250,259 | CAAGCCAAATGGCTCCTGTTC |
TDF | 103,248,974 | 103,248,996 | GGCCCATCCCAACTATACTCTTC |
TDP | 103,248,948 | 103,248,971 | CCCACTGAGACACCCTTGGCCTTA |
TDR | 103,248,904 | 103,248,922 | CCACGGACAGCAGGCTTAG |
PCR Primers
Primer | Sequence |
SU | CCCAAACCTGAGAAAGACTGG |
SD | CACCAATGAACTGAAGGCAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 140 bp | + | + | - |
TDF | TDR | 93 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17653A-A5 | VGB6 | C57BL/6NTac | |
17653A-C11 | VGB6 | C57BL/6NTac | |
17653A-E7 | VGB6 | C57BL/6NTac | |
17653A-C3 | VGB6 | C57BL/6NTac | |
17653A-A8 | VGB6 | C57BL/6NTac | |