17677   Recql     Status: ES cell colonies screened / QC positives

GeneRecql
Chromosome6
Deletion Start142,384,541
Deletion End142,362,693
Deletion Size21,849
Genome Build38
MGI IDMGI:103021
NCBI Gene ID19691
BAC ID422G22
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 6

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF142,383,969142,383,988AGGGTTACAACAGCAAGCAC
TUP142,383,941142,383,967ACTAGTCACTCGCCATCTCCCTAGTTC
TUR142,383,913142,383,934AGGTCCCATTCTAGGGATACAC
TDF142,363,641142,363,660ACGGCTTACGCCACCATCTC
TDP142,363,613142,363,638ATCTGAAGGTGGGACCCAGAGCTTGT
TDR142,363,562142,363,584TGCTGACTTCTTCACTTGCATAG

PCR Primers

PrimerSequence
SUAAACGATGCTCTCCAGGAAC
SDGCTCCTCTGTTTGCCTGAAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR76 bp++-
TDFTDR99 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17677A-B10VGB6C57BL/6NTac
17677A-D9VGB6C57BL/6NTac
17677A-G10VGB6C57BL/6NTac
17677A-E12VGB6C57BL/6NTac