17709   Wdr47     Status: ES cell colonies screened / QC positives

GeneWdr47
Chromosome3
Deletion Start108,644,685
Deletion End108,609,889
Deletion Size34,797
Genome Build38
MGI IDMGI:2139593
NCBI Gene ID99512
BAC ID271O11
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 3

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF108,609,979108,609,998CTGGCGCTGGAGAAGGAAAG
TUP108,609,999108,610,020TGGAGTCATAAATGGCCTGTTT
TUR108,610,024108,610,048CGTACCTCAGGAAGAGCATATCATC
TDF108,643,887108,643,904TGAGGCAGGGCAGACTTG
TDP108,643,911108,643,938TCGTGACACTGTAGGAAGTTGACGTGTT
TDR108,643,940108,643,964TCTCTTTCCTGGGTTGACTATGTTC

PCR Primers

PrimerSequence
SUCTGTCACTGCTAGACTATTCTG
SDGGATCGTGACAAGAGCAAAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR70 bp++-
TDFTDR78 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17709A-B8VGB6C57BL/6NTac
17709A-G3VGB6C57BL/6NTac
17709A-B5VGB6C57BL/6NTac
17709A-D2VGB6C57BL/6NTac
17709A-D3VGB6C57BL/6NTac
17709A-F10VGB6C57BL/6NTac