17722   Acox1     Status: ES cell colonies screened / QC positives

GeneAcox1
Chromosome11
Deletion Start116,198,701
Deletion End116,173,453
Deletion Size25,249
Genome Build38
MGI IDMGI:1330812
NCBI Gene ID11430
BAC ID238N15
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 11

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF116,198,639116,198,660TCCAGAGTTAATCACGCACATC
TUP116,198,614116,198,638TTGGATGGTAGTCCGGAGAACACCC
TUR116,198,585116,198,604TCCAGGCTCACCGATTTCTC
TDF116,174,367116,174,384TGACCCTTGGCTCTGTTC
TDP116,174,344116,174,366TCGGCCGCTATGATGGCAATGTG
TDR116,174,310116,174,328GGGACTTCTTGGCCCACTC

PCR Primers

PrimerSequence
SUTTTACCTTGCTTTCCTTGGC
SDTGTAAGGGCCACACACTCAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR76 bp++-
TDFTDR75 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17722A-C5VGB6C57BL/6NTac
17722A-H4VGB6C57BL/6NTac