Gene | St3gal2 |
Chromosome | 8 |
Deletion Start | 110,970,359 |
Deletion End | 110,957,715 |
Deletion Size | 12,645 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 8
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 110,958,179 | 110,958,199 | ACTCCCAGCACCCTGACAAAG |
TUP | 110,958,200 | 110,958,222 | CAGGAAGCCCACCTGAGCTGAGC |
TUR | 110,958,230 | 110,958,248 | GCAGCGGTCTGTGATCCAG |
TDF | 110,970,195 | 110,970,212 | GTGCATGACGCCGACTTC |
TDP | 110,970,215 | 110,970,239 | AGCCCACATCATCGACATGCTGGCC |
TDR | 110,970,258 | 110,970,277 | GCTCAGTTCCCTCGGTAGAC |
PCR Primers
Primer | Sequence |
SU | CACAAGGGACTAGAGGGCTG |
SD | GCACATGTGAGAGAAGCACC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 70 bp | + | + | - |
TDF | TDR | 83 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17772A-D3 | VGB6 | C57BL/6NTac | |
17772A-E9 | VGB6 | C57BL/6NTac | |
17772A-E6 | VGB6 | C57BL/6NTac | |
17772A-E12 | VGB6 | C57BL/6NTac | |
17772A-F3 | VGB6 | C57BL/6NTac | |